Dca19782.1
Annotation
- 2-exons
- f-1
- sp|F6H3D1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g03300#GO:0008270#1F0P0C
- AT5G11620.1 | Symbols: | SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related | chr5:3739076-3740127 REVERSE LENGTH=273
- Repeat List (scaffold2039)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19782.1 |
2 |
162 |
192 |
48.43 |
161 |
58 |
5e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H3D1_VITVI |
10 |
161 |
233 |
65.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19782.1 |
18 |
160 |
192 |
38.02 |
143 |
49 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0554100-00 |
23 |
173 |
264 |
57.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2039 |
Augustus |
mRNA |
1834 |
4400 |
. |
- |
. |
ID=Dca19782.1;Parent=Dca19782 |
| scaffold2039 |
Augustus |
exon |
1834 |
1912 |
. |
- |
. |
ID=Dca19782.1.exon1;Parent=Dca19782.1 |
| scaffold2039 |
Augustus |
exon |
3901 |
4400 |
. |
- |
. |
ID=Dca19782.1.exon2;Parent=Dca19782.1 |
