Carnation DB

Dca19829.1

Annotation

7-exons
f-1
sp|B9SC51_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1407440#unknown#0F0P0C
AT4G37020.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1). | chr4:17445778-17447178 FORWARD LENGTH=258
Repeat List (scaffold2042)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19829.1	20	207	207	67.63	188	75	7e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9SC51_RICCO	20	207	207	90.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19829.1	4	203	207	65.21	200	67	2e-65
Target_name	Start	End	Length	Cov(%)
AT4G37020.2	6	208	258	78.68

seqname	source	feature	start	end	score	strand	frame	group
scaffold2042	Augustus	mRNA	7176	10192	.	+	.	ID=Dca19829.1;Parent=Dca19829
scaffold2042	Augustus	exon	7176	7225	.	+	.	ID=Dca19829.1.exon1;Parent=Dca19829.1
scaffold2042	Augustus	exon	7340	7388	.	+	.	ID=Dca19829.1.exon2;Parent=Dca19829.1
scaffold2042	Augustus	exon	7498	7635	.	+	.	ID=Dca19829.1.exon3;Parent=Dca19829.1
scaffold2042	Augustus	exon	9331	9561	.	+	.	ID=Dca19829.1.exon4;Parent=Dca19829.1
scaffold2042	Augustus	exon	9756	9795	.	+	.	ID=Dca19829.1.exon5;Parent=Dca19829.1
scaffold2042	Augustus	exon	9893	9990	.	+	.	ID=Dca19829.1.exon6;Parent=Dca19829.1
scaffold2042	Augustus	exon	10175	10192	.	+	.	ID=Dca19829.1.exon7;Parent=Dca19829.1