Carnation DB

Dca19872.1

Annotation

5-exons
f-1
sp|B9I3R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_423272#GO:0003993;GO:0046872#2F0P0C
sp|G7JLE0_MEDTR#Nucleotide pyrophosphatase/phosphodiesterase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g103520#GO:0003993;GO:0046872#2F0P0C
Repeat List (scaffold20464)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19872.1	2	335	335	78.5	334	79	6e-165
Target_name	Start	End	Length	Cov(%)
sp\|B9I3R0_POPTR	259	592	592	56.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19872.1	2	335	335	77.01	334	78	6e-160
Target_name	Start	End	Length	Cov(%)
AT5G50400.1	278	611	611	54.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20464	Augustus	mRNA	1	1395	.	+	.	ID=Dca19872.1;Parent=Dca19872
scaffold20464	Augustus	exon	1	60	.	+	.	ID=Dca19872.1.exon1;Parent=Dca19872.1
scaffold20464	Augustus	exon	154	359	.	+	.	ID=Dca19872.1.exon2;Parent=Dca19872.1
scaffold20464	Augustus	exon	479	604	.	+	.	ID=Dca19872.1.exon3;Parent=Dca19872.1
scaffold20464	Augustus	exon	700	1009	.	+	.	ID=Dca19872.1.exon4;Parent=Dca19872.1
scaffold20464	Augustus	exon	1090	1395	.	+	.	ID=Dca19872.1.exon5;Parent=Dca19872.1