Dca19880.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2047)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19880.1 |
45 |
305 |
317 |
47.94 |
261 |
59 |
2e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1266 |
1526 |
1553 |
16.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19880.1 |
77 |
303 |
317 |
29.02 |
227 |
41 |
9e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
3 |
229 |
230 |
98.69 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2047 |
Augustus |
mRNA |
20089 |
21344 |
. |
- |
. |
ID=Dca19880.1;Parent=Dca19880 |
| scaffold2047 |
Augustus |
exon |
20089 |
20952 |
. |
- |
. |
ID=Dca19880.1.exon1;Parent=Dca19880.1 |
| scaffold2047 |
Augustus |
exon |
21255 |
21344 |
. |
- |
. |
ID=Dca19880.1.exon2;Parent=Dca19880.1 |
