Dca19987.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold20543)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19987.1 |
29 |
645 |
645 |
45.58 |
617 |
43 |
5e-151
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
703 |
1501 |
45.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19987.1 |
303 |
640 |
645 |
19.68 |
338 |
38 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
724 |
1539 |
20.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold20543 |
Augustus |
mRNA |
1 |
2146 |
. |
- |
. |
ID=Dca19987.1;Parent=Dca19987 |
| scaffold20543 |
Augustus |
exon |
1 |
1455 |
. |
- |
. |
ID=Dca19987.1.exon1;Parent=Dca19987.1 |
| scaffold20543 |
Augustus |
exon |
1667 |
2146 |
. |
- |
. |
ID=Dca19987.1.exon2;Parent=Dca19987.1 |
