Carnation DB

Dca2004.1

Annotation

7-exons
f-1
sp|E0CPJ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g13660#unknown#0F0P0C
AT4G29860.1 | Symbols: EMB2757, TAN | Transducin/WD40 repeat-like superfamily protein | chr4:14603296-14605704 REVERSE LENGTH=386
Repeat List (scaffold1065)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2004.1	117	228	230	23.47	112	49	1e-23
Target_name	Start	End	Length	Cov(%)
sp\|E0CPJ0_VITVI	146	253	382	28.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2004.1	102	228	230	23.91	127	44	4e-22
Target_name	Start	End	Length	Cov(%)
AT4G29860.1	133	253	386	31.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1065	Augustus	mRNA	81358	83674	.	+	.	ID=Dca2004.1;Parent=Dca2004
scaffold1065	Augustus	exon	81358	81513	.	+	.	ID=Dca2004.1.exon1;Parent=Dca2004.1
scaffold1065	Augustus	exon	82080	82241	.	+	.	ID=Dca2004.1.exon2;Parent=Dca2004.1
scaffold1065	Augustus	exon	82527	82623	.	+	.	ID=Dca2004.1.exon3;Parent=Dca2004.1
scaffold1065	Augustus	exon	82831	82889	.	+	.	ID=Dca2004.1.exon4;Parent=Dca2004.1
scaffold1065	Augustus	exon	82980	83073	.	+	.	ID=Dca2004.1.exon5;Parent=Dca2004.1
scaffold1065	Augustus	exon	83188	83254	.	+	.	ID=Dca2004.1.exon6;Parent=Dca2004.1
scaffold1065	Augustus	exon	83617	83674	.	+	.	ID=Dca2004.1.exon7;Parent=Dca2004.1