Dca2022.1
Annotation
- 3-exons
- f-1
- sp|B9N3J0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580943#unknown#0F0P0C
- Repeat List (scaffold1066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2022.1 |
1 |
95 |
96 |
57.29 |
95 |
57 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N3J0_POPTR |
1 |
97 |
98 |
98.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2022.1 |
4 |
95 |
96 |
51.04 |
92 |
52 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G33847.1 |
1 |
92 |
93 |
98.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1066 |
Augustus |
mRNA |
27562 |
29840 |
. |
+ |
. |
ID=Dca2022.1;Parent=Dca2022 |
| scaffold1066 |
Augustus |
exon |
27562 |
27710 |
. |
+ |
. |
ID=Dca2022.1.exon1;Parent=Dca2022.1 |
| scaffold1066 |
Augustus |
exon |
28002 |
28123 |
. |
+ |
. |
ID=Dca2022.1.exon2;Parent=Dca2022.1 |
| scaffold1066 |
Augustus |
exon |
29821 |
29840 |
. |
+ |
. |
ID=Dca2022.1.exon3;Parent=Dca2022.1 |
