Dca2024.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold1066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2024.1 |
73 |
700 |
788 |
36.8 |
628 |
42 |
8e-126
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
686 |
1717 |
39.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2024.1 |
518 |
592 |
788 |
3.29 |
75 |
35 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
150 |
150 |
49.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1066 |
Augustus |
mRNA |
39666 |
42322 |
. |
- |
. |
ID=Dca2024.1;Parent=Dca2024 |
| scaffold1066 |
Augustus |
exon |
39666 |
39934 |
. |
- |
. |
ID=Dca2024.1.exon1;Parent=Dca2024.1 |
| scaffold1066 |
Augustus |
exon |
40123 |
41700 |
. |
- |
. |
ID=Dca2024.1.exon2;Parent=Dca2024.1 |
| scaffold1066 |
Augustus |
exon |
41803 |
42322 |
. |
- |
. |
ID=Dca2024.1.exon3;Parent=Dca2024.1 |
