Dca2027.1
Annotation
- 3-exons
- f-1
- sp|B9N3J0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580943#unknown#0F0P0C
- Repeat List (scaffold1066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2027.1 |
1 |
88 |
96 |
55.2 |
88 |
59 |
7e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N3J0_POPTR |
1 |
90 |
98 |
91.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2027.1 |
23 |
96 |
96 |
42.7 |
74 |
53 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G28395.2 |
21 |
95 |
95 |
78.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1066 |
Augustus |
mRNA |
60913 |
62451 |
. |
+ |
. |
ID=Dca2027.1;Parent=Dca2027 |
| scaffold1066 |
Augustus |
exon |
60913 |
61061 |
. |
+ |
. |
ID=Dca2027.1.exon1;Parent=Dca2027.1 |
| scaffold1066 |
Augustus |
exon |
61363 |
61484 |
. |
+ |
. |
ID=Dca2027.1.exon2;Parent=Dca2027.1 |
| scaffold1066 |
Augustus |
exon |
62432 |
62451 |
. |
+ |
. |
ID=Dca2027.1.exon3;Parent=Dca2027.1 |
