Dca20526.1
Annotation
- 4-exons
- f-1
- sp|B9IIE5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576428#GO:0005488#1F0P0C
- AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
- Repeat List (scaffold21)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20526.1 |
349 |
740 |
761 |
22.47 |
392 |
44 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IIE5_POPTR |
111 |
499 |
505 |
77.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20526.1 |
349 |
702 |
761 |
18.92 |
354 |
41 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G20710.1 |
90 |
440 |
490 |
71.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold21 |
Augustus |
mRNA |
77086 |
83471 |
. |
- |
. |
ID=Dca20526.1;Parent=Dca20526 |
| scaffold21 |
Augustus |
exon |
77086 |
78321 |
. |
- |
. |
ID=Dca20526.1.exon1;Parent=Dca20526.1 |
| scaffold21 |
Augustus |
exon |
80695 |
80841 |
. |
- |
. |
ID=Dca20526.1.exon2;Parent=Dca20526.1 |
| scaffold21 |
Augustus |
exon |
80930 |
81016 |
. |
- |
. |
ID=Dca20526.1.exon3;Parent=Dca20526.1 |
| scaffold21 |
Augustus |
exon |
82656 |
83471 |
. |
- |
. |
ID=Dca20526.1.exon4;Parent=Dca20526.1 |
