Carnation DB

Dca20527.1

Annotation

6-exons
f-1
sp|A9NN70_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0005850;GO:0003743#1F0P1C
Os03t0296400-03 Similar to Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF- 2alpha) (EIF-2A) (Fragment).
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20527.1	3	334	340	78.23	332	81	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|A9NN70_PICSI	7	336	343	96.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20527.1	1	339	340	77.64	339	78	8e-150
Target_name	Start	End	Length	Cov(%)
Os03t0296400-03	1	337	340	99.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augus-PASA	mRNA	84994	88306	.	-	.	ID=Dca20527.1;Parent=Dca20527
scaffold21	Augus-PASA	exon	84994	85149	.	-	.	ID=Dca20527.1.exon1;Parent=Dca20527.1
scaffold21	Augus-PASA	exon	85244	85342	.	-	.	ID=Dca20527.1.exon2;Parent=Dca20527.1
scaffold21	Augus-PASA	exon	86324	86428	.	-	.	ID=Dca20527.1.exon3;Parent=Dca20527.1
scaffold21	Augus-PASA	exon	86703	86849	.	-	.	ID=Dca20527.1.exon4;Parent=Dca20527.1
scaffold21	Augus-PASA	exon	86953	87039	.	-	.	ID=Dca20527.1.exon5;Parent=Dca20527.1
scaffold21	Augus-PASA	exon	87878	88306	.	-	.	ID=Dca20527.1.exon6;Parent=Dca20527.1