Carnation DB

Dca20555.1

Annotation

7-exons
f-1
sp|D7TTH5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00480#GO:0005737;GO:0005524;GO:0003677;GO:0004386;GO:0008270;GO:0000184#4F1P1C
AT5G47010.1 | Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative | chr5:19072009-19078856 FORWARD LENGTH=1254
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20555.1	118	256	256	36.32	139	66	4e-40
Target_name	Start	End	Length	Cov(%)
sp\|D7TTH5_VITVI	1126	1267	1267	11.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20555.1	124	229	256	24.21	106	59	7e-28
Target_name	Start	End	Length	Cov(%)
AT5G47010.1	1129	1233	1254	8.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	319989	322163	.	-	.	ID=Dca20555.1;Parent=Dca20555
scaffold21	Augustus	exon	319989	320135	.	-	.	ID=Dca20555.1.exon1;Parent=Dca20555.1
scaffold21	Augustus	exon	320604	320723	.	-	.	ID=Dca20555.1.exon2;Parent=Dca20555.1
scaffold21	Augustus	exon	320798	320929	.	-	.	ID=Dca20555.1.exon3;Parent=Dca20555.1
scaffold21	Augustus	exon	321167	321204	.	-	.	ID=Dca20555.1.exon4;Parent=Dca20555.1
scaffold21	Augustus	exon	321283	321353	.	-	.	ID=Dca20555.1.exon5;Parent=Dca20555.1
scaffold21	Augustus	exon	321641	321752	.	-	.	ID=Dca20555.1.exon6;Parent=Dca20555.1
scaffold21	Augustus	exon	322013	322163	.	-	.	ID=Dca20555.1.exon7;Parent=Dca20555.1