Carnation DB

Dca20585.1

Annotation

7-exons
f-1
sp|B9IDP1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_574729#GO:0003723#1F0P0C
AT5G53060.1 | Symbols: | RNA-binding KH domain-containing protein | chr5:21515355-21518197 FORWARD LENGTH=652
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20585.1	4	427	428	58.41	424	57	2e-123
Target_name	Start	End	Length	Cov(%)
sp\|B9IDP1_POPTR	248	683	685	63.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20585.1	4	427	428	52.57	424	52	7e-110
Target_name	Start	End	Length	Cov(%)
AT5G53060.1	230	650	652	64.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	578906	582161	.	+	.	ID=Dca20585.1;Parent=Dca20585
scaffold21	Augustus	exon	578906	579337	.	+	.	ID=Dca20585.1.exon1;Parent=Dca20585.1
scaffold21	Augustus	exon	579855	580100	.	+	.	ID=Dca20585.1.exon2;Parent=Dca20585.1
scaffold21	Augustus	exon	580693	580941	.	+	.	ID=Dca20585.1.exon3;Parent=Dca20585.1
scaffold21	Augustus	exon	581223	581323	.	+	.	ID=Dca20585.1.exon4;Parent=Dca20585.1
scaffold21	Augustus	exon	581418	581532	.	+	.	ID=Dca20585.1.exon5;Parent=Dca20585.1
scaffold21	Augustus	exon	581628	581754	.	+	.	ID=Dca20585.1.exon6;Parent=Dca20585.1
scaffold21	Augustus	exon	582145	582161	.	+	.	ID=Dca20585.1.exon7;Parent=Dca20585.1