Carnation DB

Dca20623.1

Annotation

7-exons
f-1
sp|B9HDU1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818987#GO:0016021#0F0P1C
AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr5:6677124-6679127 FORWARD LENGTH=288
Repeat List (scaffold210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20623.1	46	225	225	66.66	180	84	6e-85
Target_name	Start	End	Length	Cov(%)
sp\|B9HDU1_POPTR	107	286	286	62.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20623.1	50	225	225	58.22	176	75	4e-73
Target_name	Start	End	Length	Cov(%)
AT5G19750.1	113	288	288	61.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold210	Augus-PASA	mRNA	43622	46472	.	-	.	ID=Dca20623.1;Parent=Dca20623
scaffold210	Augus-PASA	exon	43622	43702	.	-	.	ID=Dca20623.1.exon1;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	43909	43995	.	-	.	ID=Dca20623.1.exon2;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	44089	44181	.	-	.	ID=Dca20623.1.exon3;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	44305	44377	.	-	.	ID=Dca20623.1.exon4;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	44533	44627	.	-	.	ID=Dca20623.1.exon5;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	44801	44888	.	-	.	ID=Dca20623.1.exon6;Parent=Dca20623.1
scaffold210	Augus-PASA	exon	46312	46472	.	-	.	ID=Dca20623.1.exon7;Parent=Dca20623.1