Carnation DB

Dca20707.1

Annotation

6-exons
f-2
sp|F6I4M0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0060g02280#GO:0008270#1F0P0C
AT3G05545.1 | Symbols: | RING/U-box superfamily protein | chr3:1609436-1612133 FORWARD LENGTH=425
Repeat List (scaffold2103)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20707.1	7	412	415	61.92	406	62	1e-127
Target_name	Start	End	Length	Cov(%)
sp\|F6I4M0_VITVI	8	420	423	97.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20707.1	22	300	415	37.59	279	54	4e-66
Target_name	Start	End	Length	Cov(%)
AT3G05545.1	34	324	425	68.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2103	Augustus	mRNA	340	4598	.	+	.	ID=Dca20707.1;Parent=Dca20707
scaffold2103	Augustus	exon	340	494	.	+	.	ID=Dca20707.1.exon1;Parent=Dca20707.1
scaffold2103	Augustus	exon	1631	1797	.	+	.	ID=Dca20707.1.exon2;Parent=Dca20707.1
scaffold2103	Augustus	exon	2300	2352	.	+	.	ID=Dca20707.1.exon3;Parent=Dca20707.1
scaffold2103	Augustus	exon	3091	3116	.	+	.	ID=Dca20707.1.exon4;Parent=Dca20707.1
scaffold2103	Augustus	exon	3209	3599	.	+	.	ID=Dca20707.1.exon5;Parent=Dca20707.1
scaffold2103	Augustus	exon	4142	4598	.	+	.	ID=Dca20707.1.exon6;Parent=Dca20707.1