Carnation DB

Dca20768.1

Annotation

6-exons
f-1
sp|D7SL36_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02270#GO:0005634;GO:0003700#1F0P1C
AT5G12840.1 | Symbols: HAP2A, EMB2220, ATHAP2A, NF-YA1 | nuclear factor Y, subunit A1 | chr5:4051147-4052961 REVERSE LENGTH=272
Repeat List (scaffold211)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20768.1	56	247	295	41.01	192	64	4e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7SL36_VITVI	19	206	306	61.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20768.1	56	240	295	33.22	185	53	9e-44
Target_name	Start	End	Length	Cov(%)
AT5G12840.1	59	235	272	65.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold211	Augus-PASA	mRNA	34954	37177	.	-	.	ID=Dca20768.1;Parent=Dca20768
scaffold211	Augus-PASA	exon	34954	35084	.	-	.	ID=Dca20768.1.exon1;Parent=Dca20768.1
scaffold211	Augus-PASA	exon	35188	35314	.	-	.	ID=Dca20768.1.exon2;Parent=Dca20768.1
scaffold211	Augus-PASA	exon	35487	35654	.	-	.	ID=Dca20768.1.exon3;Parent=Dca20768.1
scaffold211	Augus-PASA	exon	36480	36551	.	-	.	ID=Dca20768.1.exon4;Parent=Dca20768.1
scaffold211	Augus-PASA	exon	36632	36747	.	-	.	ID=Dca20768.1.exon5;Parent=Dca20768.1
scaffold211	Augustus	exon	36904	37177	.	-	.	ID=Dca20768.1.exon6;Parent=Dca20768.1