Carnation DB

Dca20775.1

Annotation

8-exons
f-1
sp|B9HNV7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1087962#GO:0003676;GO:0000166#2F0P0C
Os03t0174100-02 Similar to RNA Binding Protein 45.
Repeat List (scaffold211)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20775.1	3	427	434	69.58	425	71	5e-177
Target_name	Start	End	Length	Cov(%)
sp\|B9HNV7_POPTR	1	414	415	99.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20775.1	13	423	434	64.97	411	69	1e-163
Target_name	Start	End	Length	Cov(%)
Os03t0174100-02	6	412	417	97.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold211	Augus-PASA	mRNA	122131	125851	.	-	.	ID=Dca20775.1;Parent=Dca20775
scaffold211	Augus-PASA	exon	122131	122242	.	-	.	ID=Dca20775.1.exon1;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	122334	122431	.	-	.	ID=Dca20775.1.exon2;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	122713	122868	.	-	.	ID=Dca20775.1.exon3;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	122996	123092	.	-	.	ID=Dca20775.1.exon4;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	123354	123484	.	-	.	ID=Dca20775.1.exon5;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	123581	123663	.	-	.	ID=Dca20775.1.exon6;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	123780	124263	.	-	.	ID=Dca20775.1.exon7;Parent=Dca20775.1
scaffold211	Augus-PASA	exon	125708	125851	.	-	.	ID=Dca20775.1.exon8;Parent=Dca20775.1