Carnation DB

Dca20813.1

Annotation

6-exons
f-1
sp|A5BP46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041843#GO:0003824#1F0P0C
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein | chr5:3374443-3377332 REVERSE LENGTH=580
Repeat List (scaffold21133)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20813.1	4	229	573	24.08	226	54	1e-62
Target_name	Start	End	Length	Cov(%)
sp\|A5BP46_VITVI	175	427	1120	22.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20813.1	1	208	573	19.89	208	48	8e-53
Target_name	Start	End	Length	Cov(%)
AT5G10690.1	162	399	580	41.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21133	Augustus	mRNA	488	5156	.	-	.	ID=Dca20813.1;Parent=Dca20813
scaffold21133	Augustus	exon	488	1588	.	-	.	ID=Dca20813.1.exon1;Parent=Dca20813.1
scaffold21133	Augustus	exon	3769	3899	.	-	.	ID=Dca20813.1.exon2;Parent=Dca20813.1
scaffold21133	Augustus	exon	4251	4386	.	-	.	ID=Dca20813.1.exon3;Parent=Dca20813.1
scaffold21133	Augustus	exon	4557	4625	.	-	.	ID=Dca20813.1.exon4;Parent=Dca20813.1
scaffold21133	Augustus	exon	4709	4882	.	-	.	ID=Dca20813.1.exon5;Parent=Dca20813.1
scaffold21133	Augustus	exon	5046	5156	.	-	.	ID=Dca20813.1.exon6;Parent=Dca20813.1