Carnation DB

Dca20828.1

Annotation

6-exons
f-1
sp|B9I0C2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_569105#GO:0005622;GO:0005525;GO:0007264#1F1P1C
AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding family protein | chr5:22276611-22278328 REVERSE LENGTH=288
Repeat List (scaffold2115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20828.1	11	286	286	67.13	276	69	1e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9I0C2_POPTR	8	278	278	97.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20828.1	1	286	286	62.58	286	61	6e-92
Target_name	Start	End	Length	Cov(%)
AT5G54840.1	1	286	288	99.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2115	Augus-PASA	mRNA	9016	14486	.	+	.	ID=Dca20828.1;Parent=Dca20828
scaffold2115	Augus-PASA	exon	9016	9369	.	+	.	ID=Dca20828.1.exon1;Parent=Dca20828.1
scaffold2115	Augus-PASA	exon	10944	11064	.	+	.	ID=Dca20828.1.exon2;Parent=Dca20828.1
scaffold2115	Augus-PASA	exon	11242	11338	.	+	.	ID=Dca20828.1.exon3;Parent=Dca20828.1
scaffold2115	Augus-PASA	exon	11459	11498	.	+	.	ID=Dca20828.1.exon4;Parent=Dca20828.1
scaffold2115	Augus-PASA	exon	12346	12429	.	+	.	ID=Dca20828.1.exon5;Parent=Dca20828.1
scaffold2115	Augus-PASA	exon	14322	14486	.	+	.	ID=Dca20828.1.exon6;Parent=Dca20828.1