Dca2088.1
Annotation
- 3-exons
- f-988
- sp|F6H0N0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g04040#GO:0008270#1F0P0C
- AT1G77800.1 | Symbols: | PHD finger family protein | chr1:29253800-29260190 FORWARD LENGTH=1375
- Repeat List (scaffold1069)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2088.1 |
30 |
219 |
228 |
42.98 |
190 |
52 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H0N0_VITVI |
220 |
410 |
1423 |
13.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2088.1 |
31 |
216 |
228 |
40.35 |
186 |
50 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G77800.1 |
238 |
414 |
1375 |
12.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1069 |
Augus-PASA |
mRNA |
74412 |
77533 |
. |
+ |
. |
ID=Dca2088.1;Parent=Dca2088 |
| scaffold1069 |
Augus-PASA |
exon |
74412 |
74822 |
. |
+ |
. |
ID=Dca2088.1.exon1;Parent=Dca2088.1 |
| scaffold1069 |
Augustus |
exon |
74966 |
75332 |
. |
+ |
. |
ID=Dca2088.1.exon2;Parent=Dca2088.1 |
| scaffold1069 |
Augustus |
exon |
76638 |
77533 |
. |
+ |
. |
ID=Dca2088.1.exon3;Parent=Dca2088.1 |
