Carnation DB

Dca20888.1

Annotation

5-exons
f-1
sp|D7TRJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0187g00280#GO:0043169;GO:0004553;GO:0005975#2F1P0C
Os06t0311600-01 Similar to Mannan endo-1,4-beta-mannosidase 6.
Repeat List (scaffold212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20888.1	1	425	428	63.31	425	63	1e-162
Target_name	Start	End	Length	Cov(%)
sp\|D7TRJ1_VITVI	10	441	449	96.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20888.1	23	410	428	54.67	388	60	1e-132
Target_name	Start	End	Length	Cov(%)
Os06t0311600-01	41	426	441	87.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold212	Augus-PASA	mRNA	134510	138062	.	-	.	ID=Dca20888.1;Parent=Dca20888
scaffold212	Augus-PASA	exon	134510	134915	.	-	.	ID=Dca20888.1.exon1;Parent=Dca20888.1
scaffold212	Augus-PASA	exon	135089	135300	.	-	.	ID=Dca20888.1.exon2;Parent=Dca20888.1
scaffold212	Augus-PASA	exon	135525	135647	.	-	.	ID=Dca20888.1.exon3;Parent=Dca20888.1
scaffold212	Augus-PASA	exon	135847	136044	.	-	.	ID=Dca20888.1.exon4;Parent=Dca20888.1
scaffold212	Augus-PASA	exon	137715	138062	.	-	.	ID=Dca20888.1.exon5;Parent=Dca20888.1