Dca20900.1
Annotation
- 4-exons
- f-24
- sp|B9RI98_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1577330#GO:0016874#1F0P0C
- Repeat List (scaffold2121)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20900.1 |
41 |
125 |
305 |
14.42 |
85 |
45 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RI98_RICCO |
31 |
128 |
464 |
21.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20900.1 |
11 |
113 |
305 |
12.78 |
103 |
38 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0285900-00 |
3 |
103 |
412 |
24.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2121 |
Augustus |
mRNA |
2075 |
3951 |
. |
+ |
. |
ID=Dca20900.1;Parent=Dca20900 |
| scaffold2121 |
Augustus |
exon |
2075 |
2175 |
. |
+ |
. |
ID=Dca20900.1.exon1;Parent=Dca20900.1 |
| scaffold2121 |
Augustus |
exon |
2366 |
2659 |
. |
+ |
. |
ID=Dca20900.1.exon2;Parent=Dca20900.1 |
| scaffold2121 |
Augustus |
exon |
3288 |
3508 |
. |
+ |
. |
ID=Dca20900.1.exon3;Parent=Dca20900.1 |
| scaffold2121 |
Augustus |
exon |
3648 |
3951 |
. |
+ |
. |
ID=Dca20900.1.exon4;Parent=Dca20900.1 |
