Carnation DB

Dca20941.1

Annotation

5-exons
f-1
sp|D7T740_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04100#unknown#0F0P0C
AT1G04200.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr1:1109676-1113875 FORWARD LENGTH=732
Repeat List (scaffold2125)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20941.1	1	256	285	55.43	256	62	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|D7T740_VITVI	1	258	726	35.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20941.1	1	255	285	50.87	255	57	9e-78
Target_name	Start	End	Length	Cov(%)
AT1G04200.1	1	256	732	34.97

seqname	source	feature	start	end	score	strand	frame	group
scaffold2125	Augustus	mRNA	20146	23822	.	+	.	ID=Dca20941.1;Parent=Dca20941
scaffold2125	Augustus	exon	20146	20338	.	+	.	ID=Dca20941.1.exon1;Parent=Dca20941.1
scaffold2125	Augustus	exon	22552	22791	.	+	.	ID=Dca20941.1.exon2;Parent=Dca20941.1
scaffold2125	Augustus	exon	23210	23273	.	+	.	ID=Dca20941.1.exon3;Parent=Dca20941.1
scaffold2125	Augustus	exon	23362	23491	.	+	.	ID=Dca20941.1.exon4;Parent=Dca20941.1
scaffold2125	Augustus	exon	23592	23822	.	+	.	ID=Dca20941.1.exon5;Parent=Dca20941.1