Carnation DB

Dca20943.1

Annotation

12-exons
f-1
sp|B9HUQ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769259#GO:0005634;GO:0005524;GO:0008094;GO:0007131#2F1P1C
sp|B9RTJ3_RICCO#Meiotic recombination protein dmc1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0910960#GO:0005634;GO:0005524;GO:0003677;GO:0008094;GO:0007131#3F1P1C
Repeat List (scaffold2125)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20943.1	4	318	318	80.18	315	77	7e-147
Target_name	Start	End	Length	Cov(%)
sp\|B9HUQ7_POPTR	1	332	352	94.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20943.1	4	315	318	79.87	312	77	2e-139
Target_name	Start	End	Length	Cov(%)
AT3G22880.1	2	330	344	95.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2125	Augustus	mRNA	30619	34135	.	+	.	ID=Dca20943.1;Parent=Dca20943
scaffold2125	Augustus	exon	30619	30641	.	+	.	ID=Dca20943.1.exon1;Parent=Dca20943.1
scaffold2125	Augustus	exon	30809	30894	.	+	.	ID=Dca20943.1.exon2;Parent=Dca20943.1
scaffold2125	Augustus	exon	31781	31872	.	+	.	ID=Dca20943.1.exon3;Parent=Dca20943.1
scaffold2125	Augustus	exon	31978	32049	.	+	.	ID=Dca20943.1.exon4;Parent=Dca20943.1
scaffold2125	Augustus	exon	32148	32236	.	+	.	ID=Dca20943.1.exon5;Parent=Dca20943.1
scaffold2125	Augustus	exon	32687	32732	.	+	.	ID=Dca20943.1.exon6;Parent=Dca20943.1
scaffold2125	Augustus	exon	33095	33156	.	+	.	ID=Dca20943.1.exon7;Parent=Dca20943.1
scaffold2125	Augustus	exon	33263	33329	.	+	.	ID=Dca20943.1.exon8;Parent=Dca20943.1
scaffold2125	Augustus	exon	33412	33504	.	+	.	ID=Dca20943.1.exon9;Parent=Dca20943.1
scaffold2125	Augustus	exon	33600	33668	.	+	.	ID=Dca20943.1.exon10;Parent=Dca20943.1
scaffold2125	Augustus	exon	33774	33852	.	+	.	ID=Dca20943.1.exon11;Parent=Dca20943.1
scaffold2125	Augustus	exon	33957	34135	.	+	.	ID=Dca20943.1.exon12;Parent=Dca20943.1