Carnation DB

Dca2095.1

Annotation

8-exons
f-1
sp|B9HCF8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1080142#GO:0005634;GO:0003824;GO:0003677;GO:0045893;GO:0006367#2F2P1C
sp|B9S068_RICCO#Tfiif-alpha, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1299530#GO:0005634;GO:0003824;GO:0003677;GO:0045893;GO:0006367#2F2P1C
Repeat List (scaffold10695)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2095.1	1	545	546	69.04	545	68	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HCF8_POPTR	1	538	541	99.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2095.1	2	545	546	59.15	544	58	2e-157
Target_name	Start	End	Length	Cov(%)
Os10t0188100-03	3	525	530	98.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10695	Augus-PASA	mRNA	396	3592	.	-	.	ID=Dca2095.1;Parent=Dca2095
scaffold10695	Augus-PASA	exon	396	482	.	-	.	ID=Dca2095.1.exon1;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	720	923	.	-	.	ID=Dca2095.1.exon2;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	1024	1221	.	-	.	ID=Dca2095.1.exon3;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	1323	1502	.	-	.	ID=Dca2095.1.exon4;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	1615	1733	.	-	.	ID=Dca2095.1.exon5;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	2471	2847	.	-	.	ID=Dca2095.1.exon6;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	2939	3243	.	-	.	ID=Dca2095.1.exon7;Parent=Dca2095.1
scaffold10695	Augus-PASA	exon	3422	3592	.	-	.	ID=Dca2095.1.exon8;Parent=Dca2095.1