Carnation DB

Dca2097.1

Annotation

6-exons
f-3
sp|D7TQT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00970#unknown#0F0P0C
AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:17036768-17039474 REVERSE LENGTH=492
Repeat List (scaffold10697)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2097.1	1	165	166	68.07	165	69	5e-68
Target_name	Start	End	Length	Cov(%)
sp\|D7TQT9_VITVI	326	490	491	33.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2097.1	1	164	166	62.04	164	63	1e-60
Target_name	Start	End	Length	Cov(%)
AT2G40820.1	330	492	492	33.13

seqname	source	feature	start	end	score	strand	frame	group
scaffold10697	Augustus	mRNA	76	1141	.	+	.	ID=Dca2097.1;Parent=Dca2097
scaffold10697	Augustus	exon	76	84	.	+	.	ID=Dca2097.1.exon1;Parent=Dca2097.1
scaffold10697	Augustus	exon	163	279	.	+	.	ID=Dca2097.1.exon2;Parent=Dca2097.1
scaffold10697	Augustus	exon	364	422	.	+	.	ID=Dca2097.1.exon3;Parent=Dca2097.1
scaffold10697	Augustus	exon	563	697	.	+	.	ID=Dca2097.1.exon4;Parent=Dca2097.1
scaffold10697	Augustus	exon	819	968	.	+	.	ID=Dca2097.1.exon5;Parent=Dca2097.1
scaffold10697	Augustus	exon	1109	1141	.	+	.	ID=Dca2097.1.exon6;Parent=Dca2097.1