Carnation DB

Dca20997.1

Annotation

6-exons
f-1
sp|B9I9S9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572707#GO:0005524;GO:0004788;GO:0009229;GO:0006772#2F2P0C
AT1G02880.3 | Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:643063-644485 REVERSE LENGTH=267
Repeat List (scaffold213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20997.1	1	258	262	66.79	258	68	5e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9I9S9_POPTR	1	253	254	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20997.1	1	259	262	64.5	259	66	3e-97
Target_name	Start	End	Length	Cov(%)
AT1G02880.3	4	257	267	95.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold213	Augustus	mRNA	53930	57788	.	+	.	ID=Dca20997.1;Parent=Dca20997
scaffold213	Augustus	exon	53930	54071	.	+	.	ID=Dca20997.1.exon1;Parent=Dca20997.1
scaffold213	Augustus	exon	54157	54253	.	+	.	ID=Dca20997.1.exon2;Parent=Dca20997.1
scaffold213	Augustus	exon	56174	56246	.	+	.	ID=Dca20997.1.exon3;Parent=Dca20997.1
scaffold213	Augustus	exon	56449	56550	.	+	.	ID=Dca20997.1.exon4;Parent=Dca20997.1
scaffold213	Augustus	exon	56716	56965	.	+	.	ID=Dca20997.1.exon5;Parent=Dca20997.1
scaffold213	Augustus	exon	57664	57788	.	+	.	ID=Dca20997.1.exon6;Parent=Dca20997.1