Carnation DB

Dca21000.1

Annotation

5-exons
f-1
sp|D7U277_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00280#GO:0008270#1F0P0C
Os07t0673200-01 Similar to F22D16.14 protein (RING finger family protein).
Repeat List (scaffold213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21000.1	6	278	278	74.46	273	75	7e-122
Target_name	Start	End	Length	Cov(%)
sp\|D7U277_VITVI	58	324	324	82.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21000.1	5	278	278	66.18	274	67	1e-110
Target_name	Start	End	Length	Cov(%)
Os07t0673200-01	55	321	322	82.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold213	Augustus	mRNA	87452	90844	.	-	.	ID=Dca21000.1;Parent=Dca21000
scaffold213	Augustus	exon	87452	87557	.	-	.	ID=Dca21000.1.exon1;Parent=Dca21000.1
scaffold213	Augustus	exon	87903	87961	.	-	.	ID=Dca21000.1.exon2;Parent=Dca21000.1
scaffold213	Augustus	exon	88466	88630	.	-	.	ID=Dca21000.1.exon3;Parent=Dca21000.1
scaffold213	Augustus	exon	90019	90270	.	-	.	ID=Dca21000.1.exon4;Parent=Dca21000.1
scaffold213	Augustus	exon	90590	90844	.	-	.	ID=Dca21000.1.exon5;Parent=Dca21000.1