Carnation DB

Dca21066.1

Annotation

3-exons
f-1
sp|B9P620_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_677572#unknown#0F0P0C
Repeat List (scaffold2135)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21066.1	1	91	92	61.95	91	63	4e-23
Target_name	Start	End	Length	Cov(%)
sp\|B9P620_POPTR	1	90	95	94.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21066.1	4	91	92	57.6	88	59	4e-19
Target_name	Start	End	Length	Cov(%)
AT2G33847.1	1	88	93	94.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2135	Augustus	mRNA	43483	45669	.	+	.	ID=Dca21066.1;Parent=Dca21066
scaffold2135	Augustus	exon	43483	43631	.	+	.	ID=Dca21066.1.exon1;Parent=Dca21066.1
scaffold2135	Augustus	exon	43938	44059	.	+	.	ID=Dca21066.1.exon2;Parent=Dca21066.1
scaffold2135	Augustus	exon	45662	45669	.	+	.	ID=Dca21066.1.exon3;Parent=Dca21066.1
scaffold2135	Augustus	mRNA	43483	44811	.	+	.	ID=Dca21066.2;Parent=Dca21066
scaffold2135	Augustus	exon	43483	43631	.	+	.	ID=Dca21066.2.exon1;Parent=Dca21066.2
scaffold2135	Augustus	exon	43938	44059	.	+	.	ID=Dca21066.2.exon2;Parent=Dca21066.2
scaffold2135	Augustus	exon	44804	44811	.	+	.	ID=Dca21066.2.exon3;Parent=Dca21066.2