Carnation DB

Dca21078.1

Annotation

7-exons
f-1
sp|D7U572_VITVI#Peptidyl-prolyl cis-trans isomerase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02200#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold2137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21078.1	2	224	227	70.04	223	72	4e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7U572_VITVI	1	223	223	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21078.1	2	223	227	70.04	222	72	4e-86
Target_name	Start	End	Length	Cov(%)
AT4G34960.1	1	223	224	99.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2137	Augus-PASA	mRNA	15717	20003	.	-	.	ID=Dca21078.1;Parent=Dca21078
scaffold2137	Augus-PASA	exon	15717	15888	.	-	.	ID=Dca21078.1.exon1;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	16534	16609	.	-	.	ID=Dca21078.1.exon2;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	16738	16920	.	-	.	ID=Dca21078.1.exon3;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	17023	17046	.	-	.	ID=Dca21078.1.exon4;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	17471	17518	.	-	.	ID=Dca21078.1.exon5;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	18043	18121	.	-	.	ID=Dca21078.1.exon6;Parent=Dca21078.1
scaffold2137	Augus-PASA	exon	19902	20003	.	-	.	ID=Dca21078.1.exon7;Parent=Dca21078.1