Dca21103.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold214)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21103.1 |
2 |
227 |
236 |
54.66 |
226 |
43 |
7e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1184 |
1485 |
1501 |
20.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21103.1 |
54 |
230 |
236 |
30.93 |
177 |
34 |
4e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
225 |
230 |
94.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold214 |
Augustus |
mRNA |
91365 |
92307 |
. |
+ |
. |
ID=Dca21103.1;Parent=Dca21103 |
| scaffold214 |
Augustus |
exon |
91365 |
91493 |
. |
+ |
. |
ID=Dca21103.1.exon1;Parent=Dca21103.1 |
| scaffold214 |
Augustus |
exon |
91601 |
91734 |
. |
+ |
. |
ID=Dca21103.1.exon2;Parent=Dca21103.1 |
| scaffold214 |
Augustus |
exon |
91860 |
92307 |
. |
+ |
. |
ID=Dca21103.1.exon3;Parent=Dca21103.1 |
