Dca21162.1
Annotation
- 2-exons
- f-12
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold21441)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21162.1 |
1 |
705 |
705 |
51.63 |
705 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
57 |
801 |
1501 |
49.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21162.1 |
274 |
705 |
705 |
24.68 |
432 |
40 |
2e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
490 |
707 |
61.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold21441 |
Augustus |
mRNA |
52 |
2252 |
. |
- |
. |
ID=Dca21162.1;Parent=Dca21162 |
| scaffold21441 |
Augustus |
exon |
52 |
1842 |
. |
- |
. |
ID=Dca21162.1.exon1;Parent=Dca21162.1 |
| scaffold21441 |
Augustus |
exon |
1925 |
2252 |
. |
- |
. |
ID=Dca21162.1.exon2;Parent=Dca21162.1 |
