Dca21198.1
Annotation
- 4-exons
- f-1
- sp|Q2R3A0_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g32660#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
- Repeat List (scaffold2149)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21198.1 |
303 |
823 |
826 |
20.33 |
521 |
30 |
4e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R3A0_ORYSJ |
255 |
766 |
806 |
63.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21198.1 |
307 |
613 |
826 |
14.16 |
307 |
33 |
6e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
89 |
432 |
805 |
42.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2149 |
Augustus |
mRNA |
27777 |
30830 |
. |
+ |
. |
ID=Dca21198.1;Parent=Dca21198 |
| scaffold2149 |
Augustus |
exon |
27777 |
28164 |
. |
+ |
. |
ID=Dca21198.1.exon1;Parent=Dca21198.1 |
| scaffold2149 |
Augustus |
exon |
28378 |
29309 |
. |
+ |
. |
ID=Dca21198.1.exon2;Parent=Dca21198.1 |
| scaffold2149 |
Augustus |
exon |
29479 |
30006 |
. |
+ |
. |
ID=Dca21198.1.exon3;Parent=Dca21198.1 |
| scaffold2149 |
Augustus |
exon |
30198 |
30830 |
. |
+ |
. |
ID=Dca21198.1.exon4;Parent=Dca21198.1 |
