Dca2125.1
Annotation
- 4-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2125.1 |
79 |
554 |
577 |
34.14 |
476 |
41 |
2e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
37 |
504 |
1296 |
36.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2125.1 |
79 |
305 |
577 |
14.21 |
227 |
36 |
2e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
38 |
260 |
369 |
60.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold107 |
Augustus |
mRNA |
205864 |
209216 |
. |
+ |
. |
ID=Dca2125.1;Parent=Dca2125 |
| scaffold107 |
Augustus |
exon |
205864 |
205975 |
. |
+ |
. |
ID=Dca2125.1.exon1;Parent=Dca2125.1 |
| scaffold107 |
Augustus |
exon |
206780 |
206898 |
. |
+ |
. |
ID=Dca2125.1.exon2;Parent=Dca2125.1 |
| scaffold107 |
Augustus |
exon |
207599 |
209075 |
. |
+ |
. |
ID=Dca2125.1.exon3;Parent=Dca2125.1 |
| scaffold107 |
Augustus |
exon |
209191 |
209216 |
. |
+ |
. |
ID=Dca2125.1.exon4;Parent=Dca2125.1 |
