Carnation DB

Dca21258.1

Annotation

7-exons
f-1
sp|A5B3A4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002050#GO:0003676;GO:0004871;GO:0008270;GO:0009416#3F1P0C
AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:19595953-19598119 FORWARD LENGTH=468
Repeat List (scaffold2153)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21258.1	26	323	412	49.75	298	62	2e-106
Target_name	Start	End	Length	Cov(%)
sp\|A5B3A4_VITVI	110	443	1388	24.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21258.1	3	311	412	48.54	309	52	2e-91
Target_name	Start	End	Length	Cov(%)
AT2G47850.1	1	382	468	81.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2153	Augustus	mRNA	20977	25707	.	-	.	ID=Dca21258.1;Parent=Dca21258
scaffold2153	Augustus	exon	20977	21156	.	-	.	ID=Dca21258.1.exon1;Parent=Dca21258.1
scaffold2153	Augustus	exon	21688	21951	.	-	.	ID=Dca21258.1.exon2;Parent=Dca21258.1
scaffold2153	Augus-PASA	exon	22405	22707	.	-	.	ID=Dca21258.1.exon3;Parent=Dca21258.1
scaffold2153	Augustus	exon	23282	23575	.	-	.	ID=Dca21258.1.exon4;Parent=Dca21258.1
scaffold2153	Augustus	exon	23890	23955	.	-	.	ID=Dca21258.1.exon5;Parent=Dca21258.1
scaffold2153	Augustus	exon	24800	24855	.	-	.	ID=Dca21258.1.exon6;Parent=Dca21258.1
scaffold2153	Augustus	exon	25632	25707	.	-	.	ID=Dca21258.1.exon7;Parent=Dca21258.1