Carnation DB

Dca21349.1

Annotation

6-exons
f-1
sp|B9S4C3_RICCO#Uroporphyrinogen decarboxylase#Ricinus communis (Castor bean)#ORFNames=RCOM_0689410#GO:0004853;GO:0006779#1F1P0C
Repeat List (scaffold216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21349.1	28	392	392	81.37	365	88	0
Target_name	Start	End	Length	Cov(%)
sp\|B9S4C3_RICCO	25	389	389	93.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21349.1	30	392	392	77.04	363	83	2e-180
Target_name	Start	End	Length	Cov(%)
Os03t0337600-01	26	390	391	93.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold216	Augus-PASA	mRNA	137419	140341	.	-	.	ID=Dca21349.1;Parent=Dca21349
scaffold216	Augus-PASA	exon	137419	137934	.	-	.	ID=Dca21349.1.exon1;Parent=Dca21349.1
scaffold216	Augus-PASA	exon	138241	138366	.	-	.	ID=Dca21349.1.exon2;Parent=Dca21349.1
scaffold216	Augus-PASA	exon	138598	138786	.	-	.	ID=Dca21349.1.exon3;Parent=Dca21349.1
scaffold216	Augus-PASA	exon	138881	138991	.	-	.	ID=Dca21349.1.exon4;Parent=Dca21349.1
scaffold216	Augus-PASA	exon	139265	139386	.	-	.	ID=Dca21349.1.exon5;Parent=Dca21349.1
scaffold216	Augus-PASA	exon	140227	140341	.	-	.	ID=Dca21349.1.exon6;Parent=Dca21349.1