Carnation DB

Dca21373.1

Annotation

13-exons
f-1042
sp|F6H6G3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g02430#GO:0016021;GO:0005524;GO:0004672#2F0P1C
sp|B9RIN2_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1581290#GO:0016021;GO:0005524;GO:0004672#2F0P1C
Repeat List (scaffold2161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21373.1	1	341	343	52.76	341	47	2e-70
Target_name	Start	End	Length	Cov(%)
sp\|G9JKY1_MEDSA	1	383	421	90.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21373.1	1	307	343	44.89	307	46	3e-61
Target_name	Start	End	Length	Cov(%)
AT2G46270.1	1	327	382	85.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2161	Augustus	mRNA	10089	16939	.	-	.	ID=Dca21373.1;Parent=Dca21373
scaffold2161	Augustus	exon	10089	10741	.	-	.	ID=Dca21373.1.exon1;Parent=Dca21373.1
scaffold2161	Augustus	exon	10872	12097	.	-	.	ID=Dca21373.1.exon2;Parent=Dca21373.1
scaffold2161	Augustus	exon	14226	14347	.	-	.	ID=Dca21373.1.exon3;Parent=Dca21373.1
scaffold2161	Augus-PASA	exon	14436	14561	.	-	.	ID=Dca21373.1.exon4;Parent=Dca21373.1
scaffold2161	Augus-PASA	exon	14644	14721	.	-	.	ID=Dca21373.1.exon5;Parent=Dca21373.1
scaffold2161	Augustus	exon	14910	15070	.	-	.	ID=Dca21373.1.exon6;Parent=Dca21373.1
scaffold2161	Augustus	exon	15194	15236	.	-	.	ID=Dca21373.1.exon7;Parent=Dca21373.1
scaffold2161	Augustus	exon	15325	15379	.	-	.	ID=Dca21373.1.exon8;Parent=Dca21373.1
scaffold2161	PASA	exon	15681	15844	.	-	.	ID=Dca21373.1.exon9;Parent=Dca21373.1
scaffold2161	Augus-PASA	exon	16138	16209	.	-	.	ID=Dca21373.1.exon10;Parent=Dca21373.1
scaffold2161	Augus-PASA	exon	16326	16421	.	-	.	ID=Dca21373.1.exon11;Parent=Dca21373.1
scaffold2161	Augus-PASA	exon	16625	16669	.	-	.	ID=Dca21373.1.exon12;Parent=Dca21373.1
scaffold2161	Augustus	exon	16871	16939	.	-	.	ID=Dca21373.1.exon13;Parent=Dca21373.1