Carnation DB

Dca21374.1

Annotation

5-exons
f-1
sp|B9RIN5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1581330#unknown#0F0P0C
AT5G53330.1 | Symbols: | Ubiquitin-associated/translation elongation factor EF1B protein | chr5:21639236-21640716 FORWARD LENGTH=221
Repeat List (scaffold2161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21374.1	13	236	236	56.77	224	59	5e-62
Target_name	Start	End	Length	Cov(%)
sp\|B9RIN5_RICCO	6	222	222	97.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21374.1	45	236	236	47.88	192	59	4e-56
Target_name	Start	End	Length	Cov(%)
AT5G53330.1	37	221	221	83.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2161	Augus-PASA	mRNA	19258	22561	.	+	.	ID=Dca21374.1;Parent=Dca21374
scaffold2161	Augus-PASA	exon	19258	19504	.	+	.	ID=Dca21374.1.exon1;Parent=Dca21374.1
scaffold2161	Augus-PASA	exon	20090	20142	.	+	.	ID=Dca21374.1.exon2;Parent=Dca21374.1
scaffold2161	Augus-PASA	exon	20960	21133	.	+	.	ID=Dca21374.1.exon3;Parent=Dca21374.1
scaffold2161	Augus-PASA	exon	21596	21697	.	+	.	ID=Dca21374.1.exon4;Parent=Dca21374.1
scaffold2161	Augus-PASA	exon	22427	22561	.	+	.	ID=Dca21374.1.exon5;Parent=Dca21374.1