Dca21394.1
Annotation
- 3-exons
- f-1
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold2163)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
No data
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21394.1 |
177 |
254 |
441 |
5.66 |
78 |
33 |
6e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
150 |
150 |
49.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2163 |
Augustus |
mRNA |
12767 |
14360 |
. |
+ |
. |
ID=Dca21394.1;Parent=Dca21394 |
| scaffold2163 |
Augustus |
exon |
12767 |
13178 |
. |
+ |
. |
ID=Dca21394.1.exon1;Parent=Dca21394.1 |
| scaffold2163 |
Augustus |
exon |
13240 |
13569 |
. |
+ |
. |
ID=Dca21394.1.exon2;Parent=Dca21394.1 |
| scaffold2163 |
Augustus |
exon |
13777 |
14360 |
. |
+ |
. |
ID=Dca21394.1.exon3;Parent=Dca21394.1 |
