Carnation DB

Dca21497.1

Annotation

8-exons
f-1
sp|F6HHF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0080g00470#GO:0003676;GO:0000166#2F0P0C
sp|B9SWF3_RICCO#Nucleolar phosphoprotein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0292800#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold2172)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21497.1	1	516	516	61.04	516	61	3e-151
Target_name	Start	End	Length	Cov(%)
sp\|F6HHF8_VITVI	1	503	503	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21497.1	73	516	516	42.63	444	48	7e-115
Target_name	Start	End	Length	Cov(%)
AT4G00830.1	52	495	495	89.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2172	Augus-PASA	mRNA	13771	18189	.	-	.	ID=Dca21497.1;Parent=Dca21497
scaffold2172	Augus-PASA	exon	13771	13912	.	-	.	ID=Dca21497.1.exon1;Parent=Dca21497.1
scaffold2172	Augus-PASA	exon	14494	14582	.	-	.	ID=Dca21497.1.exon2;Parent=Dca21497.1
scaffold2172	Augus-PASA	exon	16040	16215	.	-	.	ID=Dca21497.1.exon3;Parent=Dca21497.1
scaffold2172	Augustus	exon	16325	16532	.	-	.	ID=Dca21497.1.exon4;Parent=Dca21497.1
scaffold2172	Augustus	exon	16689	16862	.	-	.	ID=Dca21497.1.exon5;Parent=Dca21497.1
scaffold2172	Augustus	exon	16969	17109	.	-	.	ID=Dca21497.1.exon6;Parent=Dca21497.1
scaffold2172	Augustus	exon	17475	17591	.	-	.	ID=Dca21497.1.exon7;Parent=Dca21497.1
scaffold2172	Augustus	exon	17686	18189	.	-	.	ID=Dca21497.1.exon8;Parent=Dca21497.1