Dca21523.1
Annotation
- 4-exons
- f-1
- sp|B9HCB9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_717807#unknown#0F0P0C
- Os03t0363400-01 Uncharacterised protein family UPF0153 domain containing protein.
- Repeat List (scaffold2173)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21523.1 |
27 |
185 |
186 |
52.68 |
159 |
62 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HCB9_POPTR |
17 |
165 |
168 |
88.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21523.1 |
68 |
185 |
186 |
44.62 |
118 |
71 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G02710.1 |
53 |
170 |
176 |
67.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2173 |
Augus-PASA |
mRNA |
28579 |
30040 |
. |
- |
. |
ID=Dca21523.1;Parent=Dca21523 |
| scaffold2173 |
Augus-PASA |
exon |
28579 |
28660 |
. |
- |
. |
ID=Dca21523.1.exon1;Parent=Dca21523.1 |
| scaffold2173 |
Augus-PASA |
exon |
28734 |
28821 |
. |
- |
. |
ID=Dca21523.1.exon2;Parent=Dca21523.1 |
| scaffold2173 |
Augus-PASA |
exon |
28921 |
28999 |
. |
- |
. |
ID=Dca21523.1.exon3;Parent=Dca21523.1 |
| scaffold2173 |
Augus-PASA |
exon |
29729 |
30040 |
. |
- |
. |
ID=Dca21523.1.exon4;Parent=Dca21523.1 |
