Carnation DB

Dca21536.1

Annotation

5-exons
f-1
sp|F6GTP6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g03210#GO:0008270#1F0P0C
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:27739366-27741161 REVERSE LENGTH=367
Repeat List (scaffold2175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21536.1	21	352	352	48.57	332	49	6e-74
Target_name	Start	End	Length	Cov(%)
sp\|F6GTP6_VITVI	17	370	371	95.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21536.1	23	349	352	37.78	327	37	4e-51
Target_name	Start	End	Length	Cov(%)
AT1G73760.1	24	363	367	92.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2175	Augus-PASA	mRNA	3479	9097	.	-	.	ID=Dca21536.1;Parent=Dca21536
scaffold2175	Augus-PASA	exon	3479	3610	.	-	.	ID=Dca21536.1.exon1;Parent=Dca21536.1
scaffold2175	Augus-PASA	exon	3899	4027	.	-	.	ID=Dca21536.1.exon2;Parent=Dca21536.1
scaffold2175	Augus-PASA	exon	4154	4252	.	-	.	ID=Dca21536.1.exon3;Parent=Dca21536.1
scaffold2175	Augus-PASA	exon	7222	7380	.	-	.	ID=Dca21536.1.exon4;Parent=Dca21536.1
scaffold2175	Augus-PASA	exon	8558	9097	.	-	.	ID=Dca21536.1.exon5;Parent=Dca21536.1