Carnation DB

Dca21567.1

Annotation

15-exons
f-1
sp|D7TKV8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00110#GO:0016021;GO:0006810#0F1P1C
AT5G01010.2 | Symbols: | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:1388-4924 REVERSE LENGTH=479
Repeat List (scaffold2177)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21567.1	1	427	431	71.69	427	73	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TKV8_VITVI	1	429	439	97.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21567.1	1	427	431	67.05	427	62	4e-168
Target_name	Start	End	Length	Cov(%)
AT5G01010.2	1	470	479	98.12

seqname	source	feature	start	end	score	strand	frame	group
scaffold2177	Augus-PASA	mRNA	44753	59012	.	+	.	ID=Dca21567.1;Parent=Dca21567
scaffold2177	Augus-PASA	exon	44753	44912	.	+	.	ID=Dca21567.1.exon1;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	45451	45578	.	+	.	ID=Dca21567.1.exon2;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	46075	46204	.	+	.	ID=Dca21567.1.exon3;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	48138	48294	.	+	.	ID=Dca21567.1.exon4;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	48380	48458	.	+	.	ID=Dca21567.1.exon5;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	50228	50268	.	+	.	ID=Dca21567.1.exon6;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	52181	52297	.	+	.	ID=Dca21567.1.exon7;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	54758	54838	.	+	.	ID=Dca21567.1.exon8;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	54925	54987	.	+	.	ID=Dca21567.1.exon9;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	55099	55147	.	+	.	ID=Dca21567.1.exon10;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	57029	57103	.	+	.	ID=Dca21567.1.exon11;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	57911	57958	.	+	.	ID=Dca21567.1.exon12;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	58076	58111	.	+	.	ID=Dca21567.1.exon13;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	58192	58266	.	+	.	ID=Dca21567.1.exon14;Parent=Dca21567.1
scaffold2177	Augus-PASA	exon	58956	59012	.	+	.	ID=Dca21567.1.exon15;Parent=Dca21567.1