Dca21572.1
Annotation
- 4-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2178)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21572.1 |
4 |
568 |
802 |
28.67 |
565 |
41 |
4e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
479 |
1042 |
1114 |
50.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21572.1 |
1 |
459 |
802 |
18.45 |
459 |
32 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
383 |
850 |
857 |
54.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2178 |
Augustus |
mRNA |
29957 |
39946 |
. |
+ |
. |
ID=Dca21572.1;Parent=Dca21572 |
| scaffold2178 |
Augustus |
exon |
29957 |
31730 |
. |
+ |
. |
ID=Dca21572.1.exon1;Parent=Dca21572.1 |
| scaffold2178 |
Augustus |
exon |
34961 |
35133 |
. |
+ |
. |
ID=Dca21572.1.exon2;Parent=Dca21572.1 |
| scaffold2178 |
Augustus |
exon |
37649 |
37777 |
. |
+ |
. |
ID=Dca21572.1.exon3;Parent=Dca21572.1 |
| scaffold2178 |
Augustus |
exon |
39614 |
39946 |
. |
+ |
. |
ID=Dca21572.1.exon4;Parent=Dca21572.1 |
