Carnation DB

Dca21613.1

Annotation

10-exons
f-1
sp|D7T4J0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g01910#unknown#0F0P0C
AT2G40316.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr2:16836355-16838688 FORWARD LENGTH=276
Repeat List (scaffold2180)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21613.1	8	218	218	59.17	211	59	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7T4J0_VITVI	61	279	279	78.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21613.1	8	218	218	51.83	211	52	2e-59
Target_name	Start	End	Length	Cov(%)
AT2G40316.1	58	276	276	79.34

seqname	source	feature	start	end	score	strand	frame	group
scaffold2180	Augustus	mRNA	22622	25884	.	+	.	ID=Dca21613.1;Parent=Dca21613
scaffold2180	Augustus	exon	22622	22684	.	+	.	ID=Dca21613.1.exon1;Parent=Dca21613.1
scaffold2180	Augustus	exon	22899	22969	.	+	.	ID=Dca21613.1.exon2;Parent=Dca21613.1
scaffold2180	Augustus	exon	23404	23429	.	+	.	ID=Dca21613.1.exon3;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	23922	23978	.	+	.	ID=Dca21613.1.exon4;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	24257	24363	.	+	.	ID=Dca21613.1.exon5;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	24465	24503	.	+	.	ID=Dca21613.1.exon6;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	24679	24764	.	+	.	ID=Dca21613.1.exon7;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	24891	24969	.	+	.	ID=Dca21613.1.exon8;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	25474	25521	.	+	.	ID=Dca21613.1.exon9;Parent=Dca21613.1
scaffold2180	Augus-PASA	exon	25804	25884	.	+	.	ID=Dca21613.1.exon10;Parent=Dca21613.1