Carnation DB

Dca21651.1

Annotation

5-exons
f-1
sp|A9PBW7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558193#GO:0003735;GO:0006412#1F1P0C
Os02t0162500-01 Similar to 40S ribosomal protein S14.
Repeat List (scaffold2185)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21651.1	1	138	149	90.6	138	98	6e-74
Target_name	Start	End	Length	Cov(%)
sp\|A9PBW7_POPTR	2	139	150	92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21651.1	1	138	149	88.59	138	96	7e-74
Target_name	Start	End	Length	Cov(%)
Os02t0162500-01	2	139	151	91.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2185	Augustus	mRNA	62704	63955	.	+	.	ID=Dca21651.1;Parent=Dca21651
scaffold2185	Augustus	exon	62704	62823	.	+	.	ID=Dca21651.1.exon1;Parent=Dca21651.1
scaffold2185	Augustus	exon	62929	62974	.	+	.	ID=Dca21651.1.exon2;Parent=Dca21651.1
scaffold2185	Augustus	exon	63064	63149	.	+	.	ID=Dca21651.1.exon3;Parent=Dca21651.1
scaffold2185	Augustus	exon	63250	63379	.	+	.	ID=Dca21651.1.exon4;Parent=Dca21651.1
scaffold2185	Augustus	exon	63888	63955	.	+	.	ID=Dca21651.1.exon5;Parent=Dca21651.1