Dca21675.1
Annotation
- 3-exons
- f-1
- sp|D7KLK2_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_471225#unknown#0F0P0C
- AT1G10865.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:3614789-3615308 REVERSE LENGTH=71
- Repeat List (scaffold2188)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21675.1 |
1 |
71 |
71 |
91.54 |
71 |
92 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KLK2_ARALL |
1 |
71 |
71 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21675.1 |
1 |
71 |
71 |
91.54 |
71 |
92 |
6e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G10865.1 |
1 |
71 |
71 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2188 |
Augustus |
mRNA |
21524 |
25857 |
. |
+ |
. |
ID=Dca21675.1;Parent=Dca21675 |
| scaffold2188 |
Augustus |
exon |
21524 |
21592 |
. |
+ |
. |
ID=Dca21675.1.exon1;Parent=Dca21675.1 |
| scaffold2188 |
Augustus |
exon |
25355 |
25459 |
. |
+ |
. |
ID=Dca21675.1.exon2;Parent=Dca21675.1 |
| scaffold2188 |
Augustus |
exon |
25816 |
25857 |
. |
+ |
. |
ID=Dca21675.1.exon3;Parent=Dca21675.1 |
