Carnation DB

Dca21743.1

Annotation

6-exons
f-1
sp|A5BFP7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_026191#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21743.1	280	1442	1452	35.12	1163	40	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BFP7_VITVI	615	1891	2172	58.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21743.1	716	1117	1452	8.53	402	31	3e-55
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	213	606	707	55.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2194	Augustus	mRNA	513	6710	.	+	.	ID=Dca21743.1;Parent=Dca21743
scaffold2194	Augustus	exon	513	1076	.	+	.	ID=Dca21743.1.exon1;Parent=Dca21743.1
scaffold2194	Augustus	exon	1214	1486	.	+	.	ID=Dca21743.1.exon2;Parent=Dca21743.1
scaffold2194	Augustus	exon	1603	2444	.	+	.	ID=Dca21743.1.exon3;Parent=Dca21743.1
scaffold2194	Augustus	exon	2571	4248	.	+	.	ID=Dca21743.1.exon4;Parent=Dca21743.1
scaffold2194	Augustus	exon	4317	5269	.	+	.	ID=Dca21743.1.exon5;Parent=Dca21743.1
scaffold2194	Augustus	exon	6662	6710	.	+	.	ID=Dca21743.1.exon6;Parent=Dca21743.1