Dca21796.1
Annotation
- 2-exons
- f-1
- sp|C6JRX9_SORBI#Putative uncharacterized protein Sb0013s009070#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb0013s009070#GO:0003676;GO:0015074#1F1P0C
- sp|Q2RBA0_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g02700#GO:0003676#1F0P0C
- Repeat List (scaffold2199)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21796.1 |
370 |
620 |
693 |
24.81 |
251 |
69 |
8e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C6JRX9_SORBI |
467 |
717 |
1219 |
20.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21796.1 |
370 |
582 |
693 |
15.58 |
213 |
51 |
4e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00810.1 |
14 |
225 |
240 |
88.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2199 |
Augustus |
mRNA |
25751 |
28097 |
. |
- |
. |
ID=Dca21796.1;Parent=Dca21796 |
| scaffold2199 |
Augustus |
exon |
25751 |
26712 |
. |
- |
. |
ID=Dca21796.1.exon1;Parent=Dca21796.1 |
| scaffold2199 |
Augustus |
exon |
26978 |
28097 |
. |
- |
. |
ID=Dca21796.1.exon2;Parent=Dca21796.1 |
