Carnation DB

Dca21824.1

Annotation

12-exons
f-1
sp|B9N435_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581623#GO:0005524;GO:0004674#2F0P0C
AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase 11 | chr5:9399582-9401839 REVERSE LENGTH=405
Repeat List (scaffold22)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21824.1	1	416	416	90.86	416	91	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N435_POPTR	1	409	409	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21824.1	1	416	416	89.66	416	90	0
Target_name	Start	End	Length	Cov(%)
AT5G26751.1	1	405	405	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold22	Augus-PASA	mRNA	132424	135297	.	-	.	ID=Dca21824.1;Parent=Dca21824
scaffold22	Augus-PASA	exon	132424	132506	.	-	.	ID=Dca21824.1.exon1;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	132594	132696	.	-	.	ID=Dca21824.1.exon2;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	132947	133030	.	-	.	ID=Dca21824.1.exon3;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	133123	133218	.	-	.	ID=Dca21824.1.exon4;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	133367	133417	.	-	.	ID=Dca21824.1.exon5;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	133519	133659	.	-	.	ID=Dca21824.1.exon6;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	133764	133820	.	-	.	ID=Dca21824.1.exon7;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	134315	134389	.	-	.	ID=Dca21824.1.exon8;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	134490	134762	.	-	.	ID=Dca21824.1.exon9;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	134847	134906	.	-	.	ID=Dca21824.1.exon10;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	134994	135113	.	-	.	ID=Dca21824.1.exon11;Parent=Dca21824.1
scaffold22	Augus-PASA	exon	135190	135297	.	-	.	ID=Dca21824.1.exon12;Parent=Dca21824.1